J3_5JB3_004
3D structure
- PDB id
- 5JB3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a full archaeal ribosomal translation initiation complex in the P-REMOTE conformation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.34 Å
Loop
- Sequence
- CUAG*CGUAG*CGUUAAG
- Length
- 16 nucleotides
- Bulged bases
- 5JB3|1|2|U|829, 5JB3|1|2|A|831
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5JB3|1|2|C|780
5JB3|1|2|U|781
5JB3|1|2|A|782
5JB3|1|2|G|783
*
5JB3|1|2|C|815
5JB3|1|2|G|816
5JB3|1|2|U|817
5JB3|1|2|A|818
5JB3|1|2|G|819
*
5JB3|1|2|C|826
5JB3|1|2|G|827
5JB3|1|2|U|828
5JB3|1|2|U|829
5JB3|1|2|A|830
5JB3|1|2|A|831
5JB3|1|2|G|832
Current chains
- Chain 2
- 16S ribosomal RNA
Nearby chains
- Chain 5
- mRNA
- Chain B
- 30S ribosomal protein S2
- Chain C
- 30S ribosomal protein SX
- Chain I
- 30S ribosomal protein S8
- Chain N
- 30S ribosomal protein S12
- Chain Q
- 30S ribosomal protein S15
- Chain W
- 30S ribosomal protein S27e
Coloring options: