J3_5JUO_016
3D structure
- PDB id
- 5JUO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure I (fully rotated 40S subunit)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- AAUAG*CGUAG*UCGAAUU
- Length
- 17 nucleotides
- Bulged bases
- 5JUO|1|B|A|896
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5JUO|1|B|A|827
5JUO|1|B|A|828
5JUO|1|B|U|829
5JUO|1|B|A|830
5JUO|1|B|G|831
*
5JUO|1|B|C|863
5JUO|1|B|G|864
5JUO|1|B|U|865
5JUO|1|B|A|866
5JUO|1|B|G|867
*
5JUO|1|B|U|892
5JUO|1|B|C|893
5JUO|1|B|G|894
5JUO|1|B|A|895
5JUO|1|B|A|896
5JUO|1|B|U|897
5JUO|1|B|U|898
Current chains
- Chain B
- 25S ribosomal RNA
Nearby chains
- Chain F
- uL2 (yeast L2)
- Chain LA
- eL34 (yeast L34)
- Chain W
- eL19 (yeast L19)
Coloring options: