J3_5JUT_038
3D structure
- PDB id
- 5JUT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure IV (almost non-rotated 40S subunit)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- CUGAAGUG*CAA*UCUAG
- Length
- 16 nucleotides
- Bulged bases
- 5JUT|1|B|A|1482, 5JUT|1|B|U|1484
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5JUT|1|B|C|1478
5JUT|1|B|U|1479
5JUT|1|B|G|1480
5JUT|1|B|A|1481
5JUT|1|B|A|1482
5JUT|1|B|G|1483
5JUT|1|B|U|1484
5JUT|1|B|G|1485
*
5JUT|1|B|C|1857
5JUT|1|B|A|1858
5JUT|1|B|A|1859
*
5JUT|1|B|U|1871
5JUT|1|B|C|1872
5JUT|1|B|U|1873
5JUT|1|B|A|1874
5JUT|1|B|G|1875
Current chains
- Chain B
- 25S ribosomal RNA
Nearby chains
- Chain IA
- eL31 (yeast L31)
- Chain LA
- eL34 (yeast L34)
- Chain W
- eL19 (yeast L19)
Coloring options: