J3_5K0Y_005
3D structure
- PDB id
- 5K0Y (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- m48S late-stage initiation complex, purified from rabbit reticulocytes lysates, displaying eIF2 ternary complex and eIF3 i and g subunits relocated to the intersubunit face
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.8 Å
Loop
- Sequence
- CUG*UUCCG*CAAAG
- Length
- 13 nucleotides
- Bulged bases
- 5K0Y|1|A|C|1134
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5K0Y|1|A|C|1090
5K0Y|1|A|U|1091
5K0Y|1|A|G|1092
*
5K0Y|1|A|U|1132
5K0Y|1|A|U|1133
5K0Y|1|A|C|1134
5K0Y|1|A|C|1135
5K0Y|1|A|G|1136
*
5K0Y|1|A|C|1143
5K0Y|1|A|A|1144
5K0Y|1|A|A|1145
5K0Y|1|A|A|1146
5K0Y|1|A|G|1147
Current chains
- Chain A
- 18S ribosomal RNA
Nearby chains
- Chain Y
- 40S ribosomal protein S27
- Chain a
- ribosomal protein uS8
- Chain b
- 40S ribosomal protein S21
- Chain f
- ribosomal protein uS2
- Chain k
- ribosomal protein eS26
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