J3_5L3P_002

3D structure

PDB id

5L3P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of stringent response factor RelA bound to ErmCL-stalled ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GAC*GAUAAGC*GAUUUC

Length

16 nucleotides

Bulged bases

5L3P|1|A|A|74

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5L3P|1|A|G|55
5L3P|1|A|A|56
5L3P|1|A|C|57
*
5L3P|1|A|G|70
5L3P|1|A|A|71
5L3P|1|A|U|72
5L3P|1|A|A|73
5L3P|1|A|A|74
5L3P|1|A|G|75
5L3P|1|A|C|76
*
5L3P|1|A|G|110
5L3P|1|A|A|111
5L3P|1|A|U|112
5L3P|1|A|U|113
5L3P|1|A|U|114
5L3P|1|A|C|115

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 2

50S ribosomal protein L29

Chain 7

50S ribosomal protein L34

Chain X

50S ribosomal protein L23