J3_5L3P_021

3D structure

PDB id

5L3P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of stringent response factor RelA bound to ErmCL-stalled ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GAAG*UGUGCC*GGAAC

Length

15 nucleotides

Bulged bases

5L3P|1|a|U|1025

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5L3P|1|a|G|1003
5L3P|1|a|A|1004
5L3P|1|a|A|1005
5L3P|1|a|G|1006
*
5L3P|1|a|U|1023
5L3P|1|a|G|1024
5L3P|1|a|U|1025
5L3P|1|a|G|1026
5L3P|1|a|C|1027
5L3P|1|a|C|1028
*
5L3P|1|a|G|1033
5L3P|1|a|G|1034
5L3P|1|a|A|1035
5L3P|1|a|A|1036
5L3P|1|a|C|1037

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain n

30S ribosomal protein S14