J3_5L3P_037

3D structure

PDB id

5L3P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of stringent response factor RelA bound to ErmCL-stalled ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

UGGAG*CUAC*GGAA

Length

13 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5L3P|1|a|U|943
5L3P|1|a|G|944
5L3P|1|a|G|945
5L3P|1|a|A|946
5L3P|1|a|G|947
*
5L3P|1|a|C|1234
5L3P|1|a|U|1235
5L3P|1|a|A|1236
5L3P|1|a|C|1237
*
5L3P|1|a|G|1337
5L3P|1|a|G|1338
5L3P|1|a|A|1339
5L3P|1|a|A|1340

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain g

30S ribosomal protein S7

Chain i

30S ribosomal protein S9

Chain m

30S ribosomal protein S13

Chain x

Transfer RNA; tRNA