J3_5LKS_009

3D structure

PDB id

5LKS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure-function insights reveal the human ribosome as a cancer target for antibiotics

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

AAGGGAAGUCGG*CUG*CU

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LKS|1|L5|A|2844
5LKS|1|L5|A|2845
5LKS|1|L5|G|2846
5LKS|1|L5|G|2847
5LKS|1|L5|G|2848
5LKS|1|L5|A|2849
5LKS|1|L5|A|2850
5LKS|1|L5|G|2851
5LKS|1|L5|U|2852
5LKS|1|L5|C|2853
5LKS|1|L5|G|2854
5LKS|1|L5|G|2855
*
5LKS|1|L5|C|3837
5LKS|1|L5|U|3838
5LKS|1|L5|G|3839
*
5LKS|1|L5|C|3843
5LKS|1|L5|U|3844

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LB

60S ribosomal protein L3

Chain LV

60S ribosomal protein L23

Chain LW

60S ribosomal protein L24