J3_5LKS_019
3D structure
- PDB id
- 5LKS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure-function insights reveal the human ribosome as a cancer target for antibiotics
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GAGUGGAGCCU*GCGCUAC*GGAAUUC
- Length
- 25 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5LKS|1|S2|G|1222
5LKS|1|S2|A|1223
5LKS|1|S2|G|1224
5LKS|1|S2|U|1225
5LKS|1|S2|G|1226
5LKS|1|S2|G|1227
5LKS|1|S2|A|1228
5LKS|1|S2|G|1229
5LKS|1|S2|C|1230
5LKS|1|S2|C|1231
5LKS|1|S2|U|1232
*
5LKS|1|S2|G|1526
5LKS|1|S2|C|1527
5LKS|1|S2|G|1528
5LKS|1|S2|C|1529
5LKS|1|S2|U|1530
5LKS|1|S2|A|1531
5LKS|1|S2|C|1532
*
5LKS|1|S2|G|1638
5LKS|1|S2|G|1639
5LKS|1|S2|A|1640
5LKS|1|S2|A|1641
5LKS|1|S2|U|1642
5LKS|1|S2|U|1643
5LKS|1|S2|C|1644
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain SF
- 40S ribosomal protein S5
- Chain SQ
- 40S ribosomal protein S16
- Chain SS
- 40S ribosomal protein S18
- Chain ST
- 40S ribosomal protein S19
- Chain SU
- 40S ribosomal protein S20
Coloring options: