J3_5LKS_027
3D structure
- PDB id
- 5LKS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure-function insights reveal the human ribosome as a cancer target for antibiotics
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GAGAAG*CCAUAUC*GUCUC
- Length
- 18 nucleotides
- Bulged bases
- 5LKS|1|L5|U|2788, 5LKS|1|L5|A|2789, 5LKS|1|L5|U|2790
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5LKS|1|L5|G|2400
5LKS|1|L5|A|2401
5LKS|1|L5|G|2402
5LKS|1|L5|A|2403
5LKS|1|L5|A|2404
5LKS|1|L5|G|2405
*
5LKS|1|L5|C|2785
5LKS|1|L5|C|2786
5LKS|1|L5|A|2787
5LKS|1|L5|U|2788
5LKS|1|L5|A|2789
5LKS|1|L5|U|2790
5LKS|1|L5|C|2791
*
5LKS|1|L5|G|2800
5LKS|1|L5|U|2801
5LKS|1|L5|C|2802
5LKS|1|L5|U|2803
5LKS|1|L5|C|2804
Current chains
- Chain L5
- 28S ribosomal RNA
Nearby chains
- Chain LR
- 60S ribosomal protein L19
- Chain Lg
- 60S ribosomal protein L34
- Chain Lj
- 60S ribosomal protein L37
- Chain Ll
- 60S ribosomal protein L39
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