J3_5LKS_032

3D structure

PDB id

5LKS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure-function insights reveal the human ribosome as a cancer target for antibiotics

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GUCC*GGCCUCACGAUCC*GGUGUC

Length

23 nucleotides

Bulged bases

5LKS|1|L5|C|4337, 5LKS|1|L5|U|4374

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LKS|1|L5|G|4228
5LKS|1|L5|U|4229
5LKS|1|L5|C|4230
5LKS|1|L5|C|4231
*
5LKS|1|L5|G|4330
5LKS|1|L5|G|4331
5LKS|1|L5|C|4332
5LKS|1|L5|C|4333
5LKS|1|L5|U|4334
5LKS|1|L5|C|4335
5LKS|1|L5|A|4336
5LKS|1|L5|C|4337
5LKS|1|L5|G|4338
5LKS|1|L5|A|4339
5LKS|1|L5|U|4340
5LKS|1|L5|C|4341
5LKS|1|L5|C|4342
*
5LKS|1|L5|G|4370
5LKS|1|L5|G|4371
5LKS|1|L5|U|4372
5LKS|1|L5|G|4373
5LKS|1|L5|U|4374
5LKS|1|L5|C|4375

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LQ

60S ribosomal protein L18

Chain LT

60S ribosomal protein L21

Chain La

60S ribosomal protein L27a

Chain Lo

60S ribosomal protein L36a