J3_5LKS_033

3D structure

PDB id

5LKS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure-function insights reveal the human ribosome as a cancer target for antibiotics

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

UUCCUAUC*GUUG*CACUAAUAGGGA

Length

24 nucleotides

Bulged bases

5LKS|1|L5|A|4464

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LKS|1|L5|U|4459
5LKS|1|L5|U|4460
5LKS|1|L5|C|4461
5LKS|1|L5|C|4462
5LKS|1|L5|U|4463
5LKS|1|L5|A|4464
5LKS|1|L5|U|4465
5LKS|1|L5|C|4466
*
5LKS|1|L5|G|4491
5LKS|1|L5|U|4492
5LKS|1|L5|U|4493
5LKS|1|L5|G|4494
*
5LKS|1|L5|C|4506
5LKS|1|L5|A|4507
5LKS|1|L5|C|4508
5LKS|1|L5|U|4509
5LKS|1|L5|A|4510
5LKS|1|L5|A|4511
5LKS|1|L5|U|4512
5LKS|1|L5|A|4513
5LKS|1|L5|G|4514
5LKS|1|L5|G|4515
5LKS|1|L5|G|4516
5LKS|1|L5|A|4517

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LB

60S ribosomal protein L3

Chain LO

60S ribosomal protein L13a

Chain LV

60S ribosomal protein L23