J3_5LZE_031

3D structure

PDB id

5LZE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S ribosome with Sec-tRNASec in the classical pre-translocation state (C)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GC*GGAAUAUUG*CAGC

Length

15 nucleotides

Bulged bases

5LZE|1|a|U|368

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZE|1|a|G|46
5LZE|1|a|C|47
*
5LZE|1|a|G|361
5LZE|1|a|G|362
5LZE|1|a|A|363
5LZE|1|a|A|364
5LZE|1|a|U|365
5LZE|1|a|A|366
5LZE|1|a|U|367
5LZE|1|a|U|368
5LZE|1|a|G|369
*
5LZE|1|a|C|392
5LZE|1|a|A|393
5LZE|1|a|G|394
5LZE|1|a|C|395

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain l

30S ribosomal protein S12

Chain p

30S ribosomal protein S16