J3_5LZF_022

3D structure

PDB id

5LZF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S ribosome with fMetSec-tRNASec in the hybrid pre-translocation state (H)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.6 Å

Loop

Sequence

GAAGU*AUGUGC*GAAC

Length

15 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZF|1|a|G|1003
5LZF|1|a|A|1004
5LZF|1|a|A|1005
5LZF|1|a|G|1006
5LZF|1|a|U|1007
*
5LZF|1|a|A|1022
5LZF|1|a|U|1023
5LZF|1|a|G|1024
5LZF|1|a|U|1025
5LZF|1|a|G|1026
5LZF|1|a|C|1027
*
5LZF|1|a|G|1034
5LZF|1|a|A|1035
5LZF|1|a|A|1036
5LZF|1|a|C|1037

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain n

30S ribosomal protein S14