J3_5LZS_001

3D structure

PDB id

5LZS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mammalian ribosomal elongation complex with aminoacyl-tRNA, eEF1A, and didemnin B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.31 Å

Loop

Sequence

CAGCG*CGUACG*CCGG

Length

15 nucleotides

Bulged bases

5LZS|1|5|C|159

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZS|1|5|C|112
5LZS|1|5|A|113
5LZS|1|5|G|114
5LZS|1|5|C|115
5LZS|1|5|G|116
*
5LZS|1|5|C|155
5LZS|1|5|G|156
5LZS|1|5|U|157
5LZS|1|5|A|158
5LZS|1|5|C|159
5LZS|1|5|G|160
*
5LZS|1|5|C|275
5LZS|1|5|C|276
5LZS|1|5|G|277
5LZS|1|5|G|278

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain G

eL8

Chain L

eL13

Chain N

Ribosomal protein L15

Chain h

uL29

Chain i

60S ribosomal protein L36