J3_5LZS_011

3D structure

PDB id

5LZS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mammalian ribosomal elongation complex with aminoacyl-tRNA, eEF1A, and didemnin B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.31 Å

Loop

Sequence

AGAUG*CAGU*AGGGUGUAAAU

Length

20 nucleotides

Bulged bases

5LZS|1|5|U|2763

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZS|1|5|A|2551
5LZS|1|5|G|2552
5LZS|1|5|A|2553
5LZS|1|5|U|2554
5LZS|1|5|G|2555
*
5LZS|1|5|C|2572
5LZS|1|5|A|2573
5LZS|1|5|G|2574
5LZS|1|5|U|2575
*
5LZS|1|5|A|2757
5LZS|1|5|G|2758
5LZS|1|5|G|2759
5LZS|1|5|G|2760
5LZS|1|5|U|2761
5LZS|1|5|G|2762
5LZS|1|5|U|2763
5LZS|1|5|A|2764
5LZS|1|5|A|2765
5LZS|1|5|A|2766
5LZS|1|5|U|2767

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain Z

60S ribosomal protein L27