J3_8GLP_006

3D structure

PDB id

8GLP (explore in PDB, NAKB, or RNA 3D Hub)

Description

mRNA decoding in human is kinetically and structurally distinct from bacteria (Consensus LSU focused refined structure)

Experimental method

ELECTRON MICROSCOPY

Resolution

1.67 Å

Loop

Sequence

AGAUG*CAGU*AGGGUGUAAAU

Length

20 nucleotides

Bulged bases

8GLP|1|L5|U|2763

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8GLP|1|L5|A|2551
8GLP|1|L5|G|2552
8GLP|1|L5|A|2553
8GLP|1|L5|U|2554
8GLP|1|L5|G|2555
*
8GLP|1|L5|C|2572
8GLP|1|L5|A|2573
8GLP|1|L5|G|2574
8GLP|1|L5|U|2575
*
8GLP|1|L5|A|2757
8GLP|1|L5|G|2758
8GLP|1|L5|G|2759
8GLP|1|L5|G|2760
8GLP|1|L5|U|2761
8GLP|1|L5|G|2762
8GLP|1|L5|U|2763
8GLP|1|L5|A|2764
8GLP|1|L5|A|2765
8GLP|1|L5|A|2766
8GLP|1|L5|U|2767

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LZ

60S ribosomal protein L27