J3_5LZW_001

3D structure

PDB id

5LZW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a truncated mRNA.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.53 Å

Loop

Sequence

CAGCG*CGUACG*CCGG

Length

15 nucleotides

Bulged bases

5LZW|1|5|C|159

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZW|1|5|C|112
5LZW|1|5|A|113
5LZW|1|5|G|114
5LZW|1|5|C|115
5LZW|1|5|G|116
*
5LZW|1|5|C|155
5LZW|1|5|G|156
5LZW|1|5|U|157
5LZW|1|5|A|158
5LZW|1|5|C|159
5LZW|1|5|G|160
*
5LZW|1|5|C|275
5LZW|1|5|C|276
5LZW|1|5|G|277
5LZW|1|5|G|278

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain G

eL8

Chain L

eL13

Chain N

eL15

Chain h

uL29

Chain i

eL36