J3_5LZX_045

3D structure

PDB id

5LZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a UGA stop codon.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.67 Å

Loop

Sequence

AGAUG*CAGU*AGGGUGUAAAU

Length

20 nucleotides

Bulged bases

5LZX|1|5|U|2763

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZX|1|5|A|2551
5LZX|1|5|G|2552
5LZX|1|5|A|2553
5LZX|1|5|U|2554
5LZX|1|5|G|2555
*
5LZX|1|5|C|2572
5LZX|1|5|A|2573
5LZX|1|5|G|2574
5LZX|1|5|U|2575
*
5LZX|1|5|A|2757
5LZX|1|5|G|2758
5LZX|1|5|G|2759
5LZX|1|5|G|2760
5LZX|1|5|U|2761
5LZX|1|5|G|2762
5LZX|1|5|U|2763
5LZX|1|5|A|2764
5LZX|1|5|A|2765
5LZX|1|5|A|2766
5LZX|1|5|U|2767

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain Z

60S ribosomal protein L27