J3_5LZY_003
3D structure
- PDB id
- 5LZY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a polyadenylated mRNA.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.99 Å
Loop
- Sequence
- UCC*GCCGG*CCACGCGUCCCCCGCG
- Length
- 24 nucleotides
- Bulged bases
- 5LZY|1|5|C|1237, 5LZY|1|5|C|1252, 5LZY|1|5|G|1271, 5LZY|1|5|C|1272
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5LZY|1|5|U|982
5LZY|1|5|C|983
5LZY|1|5|C|984
*
5LZY|1|5|G|1070
5LZY|1|5|C|1071
5LZY|1|5|C|1072
5LZY|1|5|G|1073
5LZY|1|5|G|1074
*
5LZY|1|5|C|1236
5LZY|1|5|C|1237
5LZY|1|5|A|1238
5LZY|1|5|C|1239
5LZY|1|5|G|1244
5LZY|1|5|C|1245
5LZY|1|5|G|1246
5LZY|1|5|U|1247
5LZY|1|5|C|1248
5LZY|1|5|C|1249
5LZY|1|5|C|1250
5LZY|1|5|C|1251
5LZY|1|5|C|1252
5LZY|1|5|G|1271
5LZY|1|5|C|1272
5LZY|1|5|G|1273
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain C
- uL4
- Chain E
- 60S ribosomal protein L6
- Chain F
- uL30
- Chain b
- eL29
Coloring options: