J3_5LZY_004

3D structure

PDB id

5LZY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a polyadenylated mRNA.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.99 Å

Loop

Sequence

GUGAACUA*UAG*CGAAC

Length

16 nucleotides

Bulged bases

5LZY|1|5|A|1534, 5LZY|1|5|G|1641

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZY|1|5|G|1530
5LZY|1|5|U|1531
5LZY|1|5|G|1532
5LZY|1|5|A|1533
5LZY|1|5|A|1534
5LZY|1|5|C|1535
5LZY|1|5|U|1536
5LZY|1|5|A|1537
*
5LZY|1|5|U|1622
5LZY|1|5|A|1623
5LZY|1|5|G|1624
*
5LZY|1|5|C|1640
5LZY|1|5|G|1641
5LZY|1|5|A|1642
5LZY|1|5|A|1643
5LZY|1|5|C|1644

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain A

uL2

Chain C

uL4

Chain N

Ribosomal protein L15

Chain j

eL37

Chain l

eL39