J3_5LZY_023
3D structure
- PDB id
- 5LZY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a polyadenylated mRNA.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.99 Å
Loop
- Sequence
- AUUC*GGACCAGAG*CAUUU
- Length
- 18 nucleotides
- Bulged bases
- 5LZY|1|9|G|991
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_5LZY_023 not in the Motif Atlas
- Homologous match to J3_4V88_033
- Geometric discrepancy: 0.1097
- The information below is about J3_4V88_033
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_38616.1
- Basepair signature
- cWW-F-cWW-F-cWW-F-cWW-F-tWW-F-cWW
- Number of instances in this motif group
- 1
Unit IDs
5LZY|1|9|A|938
5LZY|1|9|U|939
5LZY|1|9|U|940
5LZY|1|9|C|941
*
5LZY|1|9|G|985
5LZY|1|9|G|986
5LZY|1|9|A|987
5LZY|1|9|C|988
5LZY|1|9|C|989
5LZY|1|9|A|990
5LZY|1|9|G|991
5LZY|1|9|A|992
5LZY|1|9|G|993
*
5LZY|1|9|C|1000
5LZY|1|9|A|1001
5LZY|1|9|U|1002
5LZY|1|9|U|1003
5LZY|1|9|U|1004
Current chains
- Chain 9
- 18S ribosomal RNA
Nearby chains
- Chain A
- uL2
- Chain BB
- 40S ribosomal protein S3a
- Chain NN
- uS15
- Chain OO
- uS11
- Chain aa
- eS26
- Chain p
- eL43
Coloring options: