J3_5LZZ_001

3D structure

PDB id

5LZZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mammalian rescue complex with Pelota and Hbs1l (combined)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.47 Å

Loop

Sequence

CAGCG*CGUACG*CCGG

Length

15 nucleotides

Bulged bases

5LZZ|1|5|C|159

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZZ|1|5|C|112
5LZZ|1|5|A|113
5LZZ|1|5|G|114
5LZZ|1|5|C|115
5LZZ|1|5|G|116
*
5LZZ|1|5|C|155
5LZZ|1|5|G|156
5LZZ|1|5|U|157
5LZZ|1|5|A|158
5LZZ|1|5|C|159
5LZZ|1|5|G|160
*
5LZZ|1|5|C|275
5LZZ|1|5|C|276
5LZZ|1|5|G|277
5LZZ|1|5|G|278

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain G

60S ribosomal protein L7a,eL8

Chain L

eL13

Chain N

Ribosomal protein L15

Chain h

uL29

Chain i

60S ribosomal protein L36