J3_5LZZ_011

3D structure

PDB id

5LZZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mammalian rescue complex with Pelota and Hbs1l (combined)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.47 Å

Loop

Sequence

AGAUG*CAGU*AGGGUGUAAAU

Length

20 nucleotides

Bulged bases

5LZZ|1|5|U|2763

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZZ|1|5|A|2551
5LZZ|1|5|G|2552
5LZZ|1|5|A|2553
5LZZ|1|5|U|2554
5LZZ|1|5|G|2555
*
5LZZ|1|5|C|2572
5LZZ|1|5|A|2573
5LZZ|1|5|G|2574
5LZZ|1|5|U|2575
*
5LZZ|1|5|A|2757
5LZZ|1|5|G|2758
5LZZ|1|5|G|2759
5LZZ|1|5|G|2760
5LZZ|1|5|U|2761
5LZZ|1|5|G|2762
5LZZ|1|5|U|2763
5LZZ|1|5|A|2764
5LZZ|1|5|A|2765
5LZZ|1|5|A|2766
5LZZ|1|5|U|2767

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain Z

60S ribosomal protein L27