J3_5LZZ_024

3D structure

PDB id

5LZZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mammalian rescue complex with Pelota and Hbs1l (combined)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.47 Å

Loop

Sequence

CUG*UUCCG*CAAAG

Length

13 nucleotides

Bulged bases

5LZZ|1|9|C|1138

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZZ|1|9|C|1094
5LZZ|1|9|U|1095
5LZZ|1|9|G|1096
*
5LZZ|1|9|U|1136
5LZZ|1|9|U|1137
5LZZ|1|9|C|1138
5LZZ|1|9|C|1139
5LZZ|1|9|G|1140
*
5LZZ|1|9|C|1147
5LZZ|1|9|A|1148
5LZZ|1|9|A|1149
5LZZ|1|9|A|1150
5LZZ|1|9|G|1151

Current chains

Chain 9

18S ribosomal RNA

Nearby chains

Chain AA

uS2

Chain VV

eS21

Chain WW

uS8

Chain aa

eS26

Chain bb

40S ribosomal protein S27