J3_9H3G_034

3D structure

PDB id

9H3G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Arabidopsis thaliana 80S ribosome in complex with P- and E-site tRNAs and mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

1.82 Å

Loop

Sequence

CCA*UUAUG*CAAAG

Length

13 nucleotides

Bulged bases

9H3G|1|h1|A|1082, 9H3G|1|h1|A|1094

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9H3G|1|h1|C|1038
9H3G|1|h1|C|1039
9H3G|1|h1|A|1040
*
9H3G|1|h1|U|1080
9H3G|1|h1|U|1081
9H3G|1|h1|A|1082
9H3G|1|h1|U|1083
9H3G|1|h1|G|1084
*
9H3G|1|h1|C|1091
9H3G|1|h1|A|1092
9H3G|1|h1|A|1093
9H3G|1|h1|A|1094
9H3G|1|h1|G|1095

Current chains

Chain h1

Ribosomal RNA 18S

Nearby chains

Chain AE

Small ribosomal subunit protein uS8z/uS8w

Chain BW

Small ribosomal subunit protein eS21y

Chain Ma

Small ribosomal subunit protein eS26y

Chain Na

Small ribosomal subunit protein eS27y

Chain Za

Small ribosomal subunit protein uS2z