J3_5M1J_013
3D structure
- PDB id
- 5M1J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Nonstop ribosomal complex bound with Dom34 and Hbs1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- AUUGUGA*UUUACUUAUU*AAGACAUU
- Length
- 25 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5M1J|1|14|A|2432
5M1J|1|14|U|2433
5M1J|1|14|U|2434
5M1J|1|14|G|2435
5M1J|1|14|U|2436
5M1J|1|14|G|2437
5M1J|1|14|A|2438
*
5M1J|1|14|U|2508
5M1J|1|14|U|2509
5M1J|1|14|U|2510
5M1J|1|14|A|2511
5M1J|1|14|C|2512
5M1J|1|14|U|2513
5M1J|1|14|U|2514
5M1J|1|14|A|2515
5M1J|1|14|U|2516
5M1J|1|14|U|2517
*
5M1J|1|14|A|2590
5M1J|1|14|A|2591
5M1J|1|14|G|2592
5M1J|1|14|A|2593
5M1J|1|14|C|2594
5M1J|1|14|A|2595
5M1J|1|14|U|2596
5M1J|1|14|U|2597
Current chains
- Chain 14
- 25S ribosomal RNA
Nearby chains
- Chain A5
- 60S ribosomal protein L2-A
- Chain B2
- 40S ribosomal protein S1-A
- Chain G5
- 60S ribosomal protein L8-A
- Chain N5
- 60S ribosomal protein L15-A
- Chain i5
- 60S ribosomal protein L36-A
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