J3_5M1J_036

3D structure

PDB id

5M1J (explore in PDB, NAKB, or RNA 3D Hub)

Description

Nonstop ribosomal complex bound with Dom34 and Hbs1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

UCA*UGAGGACUGCG*CAAGGA

Length

20 nucleotides

Bulged bases

5M1J|1|14|A|607

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5M1J|1|14|U|502
5M1J|1|14|C|503
5M1J|1|14|A|504
*
5M1J|1|14|U|587
5M1J|1|14|G|588
5M1J|1|14|A|589
5M1J|1|14|G|590
5M1J|1|14|G|591
5M1J|1|14|A|592
5M1J|1|14|C|593
5M1J|1|14|U|594
5M1J|1|14|G|595
5M1J|1|14|C|596
5M1J|1|14|G|597
*
5M1J|1|14|C|606
5M1J|1|14|A|607
5M1J|1|14|A|608
5M1J|1|14|G|609
5M1J|1|14|G|610
5M1J|1|14|A|611

Current chains

Chain 14

25S ribosomal RNA

Nearby chains

Chain C5

60S ribosomal protein L4-A

Chain E5

60S ribosomal protein L6-A

Chain F5

60S ribosomal protein L7-A

Chain e5

60S ribosomal protein L32

Chain f5

60S ribosomal protein L33-A