J3_5MMI_005

3D structure

PDB id

5MMI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the large subunit of the chloroplast ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UGGACAU*AUAUG*CAAG

Length

16 nucleotides

Bulged bases

5MMI|1|A|U|937

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5MMI|1|A|U|856
5MMI|1|A|G|857
5MMI|1|A|G|858
5MMI|1|A|A|859
5MMI|1|A|C|860
5MMI|1|A|A|861
5MMI|1|A|U|862
*
5MMI|1|A|A|934
5MMI|1|A|U|935
5MMI|1|A|A|936
5MMI|1|A|U|937
5MMI|1|A|G|938
*
5MMI|1|A|C|958
5MMI|1|A|A|959
5MMI|1|A|A|960
5MMI|1|A|G|961

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain X

plastid ribosomal protein bL27c