J3_5MMI_015

3D structure

PDB id

5MMI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the large subunit of the chloroplast ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CCUAGG*CG*UCG

Length

11 nucleotides

Bulged bases

5MMI|1|B|U|14, 5MMI|1|B|C|110

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5MMI|1|B|C|12
5MMI|1|B|C|13
5MMI|1|B|U|14
5MMI|1|B|A|15
5MMI|1|B|G|16
5MMI|1|B|G|17
*
5MMI|1|B|C|69
5MMI|1|B|G|70
*
5MMI|1|B|U|109
5MMI|1|B|C|110
5MMI|1|B|G|111

Current chains

Chain B

5S ribosomal RNA

Nearby chains

Chain A

Large subunit ribosomal RNA; LSU rRNA

Chain P

plastid ribosomal protein uL18c

Chain X

plastid ribosomal protein bL27c