J3_5MMI_016
3D structure
- PDB id
- 5MMI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the large subunit of the chloroplast ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CAC*GUUUAUCAUUACGAU*AACAG
- Length
- 23 nucleotides
- Bulged bases
- 5MMI|1|W|A|33, 5MMI|1|W|U|34, 5MMI|1|W|C|37, 5MMI|1|W|A|39
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5MMI|1|W|C|10
5MMI|1|W|A|11
5MMI|1|W|C|12
*
5MMI|1|W|G|26
5MMI|1|W|U|27
5MMI|1|W|U|28
5MMI|1|W|U|29
5MMI|1|W|A|30
5MMI|1|W|U|31
5MMI|1|W|C|32
5MMI|1|W|A|33
5MMI|1|W|U|34
5MMI|1|W|U|35
5MMI|1|W|A|36
5MMI|1|W|C|37
5MMI|1|W|G|38
5MMI|1|W|A|39
5MMI|1|W|U|40
*
5MMI|1|W|A|86
5MMI|1|W|A|87
5MMI|1|W|C|88
5MMI|1|W|A|89
5MMI|1|W|G|90
Current chains
- Chain W
- 4.5S ribosomal RNA
Nearby chains
- Chain 1
- 50S ribosomal protein L32, chloroplastic
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain D
- plastid ribosomal protein uL3c
- Chain O
- plastid ribosomal protein bL17c
- Chain Q
- 50S ribosomal protein L19, chloroplastic
Coloring options: