J3_5MQ0_001
3D structure
- PDB id
- 5MQ0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a spliceosome remodeled for exon ligation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.17 Å
Loop
- Sequence
- CAAGAAC*GAACUUAUAAC*GG
- Length
- 20 nucleotides
- Bulged bases
- 5MQ0|1|5|G|43, 5MQ0|1|5|U|76
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5MQ0|1|5|C|40
5MQ0|1|5|A|41
5MQ0|1|5|A|42
5MQ0|1|5|G|43
5MQ0|1|5|A|44
5MQ0|1|5|A|45
5MQ0|1|5|C|46
*
5MQ0|1|5|G|69
5MQ0|1|5|A|70
5MQ0|1|5|A|71
5MQ0|1|5|C|72
5MQ0|1|5|U|73
5MQ0|1|5|U|74
5MQ0|1|5|A|75
5MQ0|1|5|U|76
5MQ0|1|5|A|77
5MQ0|1|5|A|78
5MQ0|1|5|C|79
*
5MQ0|1|5|G|113
5MQ0|1|5|G|114
Current chains
- Chain 5
- Saccharomyces cerevisiae strain WI_C_MBSP_4 chromosome VII sequence
Nearby chains
- Chain A
- Pre-mRNA-splicing factor 8
- Chain C
- Pre-mRNA-splicing factor SNU114
- Chain K
- Pre-mRNA-processing protein 45
Coloring options: