J3_5MRC_022
3D structure
- PDB id
- 5MRC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the yeast mitochondrial ribosome - Class A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.25 Å
Loop
- Sequence
- UUUAAUUC*GACUAACCUUAC*GGUAA
- Length
- 25 nucleotides
- Bulged bases
- 5MRC|1|aa|C|1040, 5MRC|1|aa|U|1041, 5MRC|1|aa|A|1043
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_5MRC_022 not in the Motif Atlas
- Homologous match to J3_5J7L_006
- Geometric discrepancy: 0.0971
- The information below is about J3_5J7L_006
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_83516.4
- Basepair signature
- cWW-tWW-F-F-F-F-F-tSS-cWW-F-F-cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
5MRC|1|aa|U|1020
5MRC|1|aa|U|1021
5MRC|1|aa|U|1022
5MRC|1|aa|A|1023
5MRC|1|aa|A|1024
5MRC|1|aa|U|1025
5MRC|1|aa|U|1026
5MRC|1|aa|C|1027
*
5MRC|1|aa|G|1038
5MRC|1|aa|A|1039
5MRC|1|aa|C|1040
5MRC|1|aa|U|1041
5MRC|1|aa|A|1042
5MRC|1|aa|A|1043
5MRC|1|aa|C|1044
5MRC|1|aa|C|1045
5MRC|1|aa|U|1046
5MRC|1|aa|U|1047
5MRC|1|aa|A|1048
5MRC|1|aa|C|1049
*
5MRC|1|aa|G|1253
5MRC|1|aa|G|1254
5MRC|1|aa|U|1255
5MRC|1|aa|A|1256
5MRC|1|aa|A|1257
Current chains
- Chain aa
- 15S ribosomal RNA
Nearby chains
- Chain JJ
- uS10m
- Chain MM
- uS13m
- Chain NN
- uS14m
- Chain SS
- uS19m
Coloring options: