J3_5MRC_024
3D structure
- PDB id
- 5MRC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the yeast mitochondrial ribosome - Class A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.25 Å
Loop
- Sequence
- CUUUAG*CAAAACU*AAUUAAG
- Length
- 20 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_5MRC_024 not in the Motif Atlas
- Homologous match to J3_5J7L_008
- Geometric discrepancy: 0.2273
- The information below is about J3_5J7L_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_08394.3
- Basepair signature
- cWW-tSS-F-F-tWH-F-F-cWW-F-cWW-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
5MRC|1|aa|C|1110
5MRC|1|aa|U|1111
5MRC|1|aa|U|1112
5MRC|1|aa|U|1113
5MRC|1|aa|A|1114
5MRC|1|aa|G|1115
*
5MRC|1|aa|C|1154
5MRC|1|aa|A|1155
5MRC|1|aa|A|1156
5MRC|1|aa|A|1157
5MRC|1|aa|A|1158
5MRC|1|aa|C|1159
5MRC|1|aa|U|1160
*
5MRC|1|aa|A|1219
5MRC|1|aa|A|1220
5MRC|1|aa|U|1221
5MRC|1|aa|U|1222
5MRC|1|aa|A|1223
5MRC|1|aa|A|1224
5MRC|1|aa|G|1225
Current chains
- Chain aa
- 15S ribosomal RNA
Nearby chains
- Chain CC
- uS3m
- Chain EE
- uS5m
- Chain II
- uS9m
- Chain JJ
- uS10m
- Chain NN
- uS14m
Coloring options: