J3_5NP6_008

3D structure

PDB id

5NP6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S structure prior to bypassing

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GAAGU*AUGUGCC*GGAAC

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5NP6|1|D|G|1003
5NP6|1|D|A|1004
5NP6|1|D|A|1005
5NP6|1|D|G|1006
5NP6|1|D|U|1007
*
5NP6|1|D|A|1022
5NP6|1|D|U|1023
5NP6|1|D|G|1024
5NP6|1|D|U|1025
5NP6|1|D|G|1026
5NP6|1|D|C|1027
5NP6|1|D|C|1028
*
5NP6|1|D|G|1033
5NP6|1|D|G|1034
5NP6|1|D|A|1035
5NP6|1|D|A|1036
5NP6|1|D|C|1037

Current chains

Chain D

16S ribosomal RNA

Nearby chains

Chain Q

30S ribosomal protein S14