J3_5NP6_010

3D structure

PDB id

5NP6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S structure prior to bypassing

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

UGU*AUGUUG*CGCAA

Length

14 nucleotides

Bulged bases

5NP6|1|D|A|1101

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5NP6|1|D|U|1073
5NP6|1|D|G|1074
5NP6|1|D|U|1075
*
5NP6|1|D|A|1082
5NP6|1|D|U|1083
5NP6|1|D|G|1084
5NP6|1|D|U|1085
5NP6|1|D|U|1086
5NP6|1|D|G|1087
*
5NP6|1|D|C|1098
5NP6|1|D|G|1099
5NP6|1|D|C|1100
5NP6|1|D|A|1101
5NP6|1|D|A|1102

Current chains

Chain D

16S ribosomal RNA

Nearby chains

Chain E

30S ribosomal protein S2

Chain H

30S ribosomal protein S5

Chain X

30S ribosomal protein S21