J3_5O60_019

3D structure

PDB id

5O60 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 50S large ribosomal subunit from Mycobacterium smegmatis

Experimental method

ELECTRON MICROSCOPY

Resolution

3.18 Å

Loop

Sequence

UAUCUUU*AGG*CUUGAUGG

Length

18 nucleotides

Bulged bases

5O60|1|A|U|330, 5O60|1|A|U|445

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5O60|1|A|U|325
5O60|1|A|A|326
5O60|1|A|U|327
5O60|1|A|C|328
5O60|1|A|U|329
5O60|1|A|U|330
5O60|1|A|U|331
*
5O60|1|A|A|350
5O60|1|A|G|351
5O60|1|A|G|352
*
5O60|1|A|C|443
5O60|1|A|U|444
5O60|1|A|U|445
5O60|1|A|G|446
5O60|1|A|A|447
5O60|1|A|U|448
5O60|1|A|G|449
5O60|1|A|G|450

Current chains

Chain A

23S rRNA

Nearby chains