J3_5O61_005

3D structure

PDB id

5O61 (explore in PDB, NAKB, or RNA 3D Hub)

Description

The complete structure of the Mycobacterium smegmatis 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.31 Å

Loop

Sequence

GUG*CGAGUAG*UGAAUC

Length

16 nucleotides

Bulged bases

5O61|1|A|U|318, 5O61|1|A|G|458

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5O61|1|A|G|317
5O61|1|A|U|318
5O61|1|A|G|319
*
5O61|1|A|C|457
5O61|1|A|G|458
5O61|1|A|A|459
5O61|1|A|G|460
5O61|1|A|U|461
5O61|1|A|A|462
5O61|1|A|G|463
*
5O61|1|A|U|487
5O61|1|A|G|488
5O61|1|A|A|489
5O61|1|A|A|490
5O61|1|A|U|491
5O61|1|A|C|492

Current chains

Chain A

23S rRNA

Nearby chains

Chain H

50S ribosomal protein L9

Chain Y

LSU ribosomal protein L28P