J3_5O61_020

3D structure

PDB id

5O61 (explore in PDB, NAKB, or RNA 3D Hub)

Description

The complete structure of the Mycobacterium smegmatis 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.31 Å

Loop

Sequence

CCC*GAUUGAU*AACCG

Length

15 nucleotides

Bulged bases

5O61|1|A|U|3054, 5O61|1|A|A|3056, 5O61|1|A|C|3105, 5O61|1|A|C|3106

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5O61|1|A|C|3035
5O61|1|A|C|3036
5O61|1|A|C|3037
*
5O61|1|A|G|3051
5O61|1|A|A|3052
5O61|1|A|U|3053
5O61|1|A|U|3054
5O61|1|A|G|3055
5O61|1|A|A|3056
5O61|1|A|U|3057
*
5O61|1|A|A|3103
5O61|1|A|A|3104
5O61|1|A|C|3105
5O61|1|A|C|3106
5O61|1|A|G|3107

Current chains

Chain A

23S rRNA

Nearby chains

Chain D

50S ribosomal protein L3

Chain O

50S ribosomal protein L17

Chain b

50S ribosomal protein L32