J3_5O61_024
3D structure
- PDB id
- 5O61 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The complete structure of the Mycobacterium smegmatis 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.31 Å
Loop
- Sequence
- UGG*CUAG*CG
- Length
- 9 nucleotides
- Bulged bases
- 5O61|1|BA|A|633
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_5O61_024 not in the Motif Atlas
- Geometric match to J3_4LFB_011
- Geometric discrepancy: 0.1489
- The information below is about J3_4LFB_011
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_56052.5
- Basepair signature
- cWW-F-cWW-cWW-F
- Number of instances in this motif group
- 5
Unit IDs
5O61|1|BA|U|566
5O61|1|BA|G|567
5O61|1|BA|G|568
*
5O61|1|BA|C|631
5O61|1|BA|U|632
5O61|1|BA|A|633
5O61|1|BA|G|634
*
5O61|1|BA|C|734
5O61|1|BA|G|735
Current chains
- Chain BA
- 16S rRNA
Nearby chains
- Chain BH
- 30S ribosomal protein S8
- Chain BL
- 30S ribosomal protein S12
- Chain BO
- 30S ribosomal protein S15
- Chain BQ
- 30S ribosomal protein S17
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