J3_5OT7_001
3D structure
- PDB id
- 5OT7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongation factor G-ribosome complex captures in the absence of inhibitors.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GC*GGAAUCU*AGC
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_5OT7_001 not in the Motif Atlas
- Homologous match to J3_6CZR_015
- Geometric discrepancy: 0.2522
- The information below is about J3_6CZR_015
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_67856.3
- Basepair signature
- cWW-cWW-cSW-cWW-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
5OT7|1|1|G|46
5OT7|1|1|C|47
*
5OT7|1|1|G|361
5OT7|1|1|G|362
5OT7|1|1|A|363
5OT7|1|1|A|364
5OT7|1|1|U|365
5OT7|1|1|C|366
5OT7|1|1|U|367
*
5OT7|1|1|A|393
5OT7|1|1|G|394
5OT7|1|1|C|395
Current chains
- Chain 1
- 16S Ribosomal RNA
Nearby chains
- Chain K
- 30S ribosomal protein S12
- Chain O
- 30S ribosomal protein S16
- Chain U
- Elongation factor G
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