3D structure

PDB id
5OT7 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Elongation factor G-ribosome complex captures in the absence of inhibitors.
Experimental method
ELECTRON MICROSCOPY
Resolution
3.8 Å

Loop

Sequence
CGCC*GGGACUGC*GAGGAAGGAG
Length
22 nucleotides
Bulged bases
5OT7|1|1|A|1183
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

5OT7|1|1|C|1116
5OT7|1|1|G|1117
5OT7|1|1|C|1118
5OT7|1|1|C|1119
*
5OT7|1|1|G|1154
5OT7|1|1|G|1155
5OT7|1|1|G|1156
5OT7|1|1|A|1157
5OT7|1|1|C|1158
5OT7|1|1|U|1159
5OT7|1|1|G|1160
5OT7|1|1|C|1161
*
5OT7|1|1|G|1175
5OT7|1|1|A|1176
5OT7|1|1|G|1177
5OT7|1|1|G|1178
5OT7|1|1|A|1179
5OT7|1|1|A|1180
5OT7|1|1|G|1181
5OT7|1|1|G|1182
5OT7|1|1|A|1183
5OT7|1|1|G|1184

Current chains

Chain 1
16S Ribosomal RNA

Nearby chains

Chain A
30S ribosomal protein S2
Chain F
30S ribosomal protein S7
Chain H
30S ribosomal protein S9
Chain I
30S ribosomal protein S10

Coloring options:

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