J3_5OT7_022
3D structure
- PDB id
- 5OT7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongation factor G-ribosome complex captures in the absence of inhibitors.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- CCAUAGCG*CAGCG*UCG
- Length
- 16 nucleotides
- Bulged bases
- 5OT7|1|5|C|12, 5OT7|1|5|U|14
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5OT7|1|5|C|11
5OT7|1|5|C|12
5OT7|1|5|A|13
5OT7|1|5|U|14
5OT7|1|5|A|15
5OT7|1|5|G|16
5OT7|1|5|C|17
5OT7|1|5|G|18
*
5OT7|1|5|C|65
5OT7|1|5|A|66
5OT7|1|5|G|67
5OT7|1|5|C|68
5OT7|1|5|G|69
*
5OT7|1|5|U|108
5OT7|1|5|C|109
5OT7|1|5|G|110
Current chains
- Chain 5
- 5S Ribosomal RNA
Nearby chains
- Chain 4
- Large subunit ribosomal RNA; LSU rRNA
- Chain 6
- 50S ribosomal protein L25
- Chain V
- 50S ribosomal protein L27
- Chain t
- 50S ribosomal protein L18
Coloring options: