J3_5T2A_002
3D structure
- PDB id
- 5T2A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of the Leishmania donovani 80S ribosome at 2.9 Angstrom resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UGAA*UGAAGG*CA
- Length
- 12 nucleotides
- Bulged bases
- 5T2A|1|2|G|1110
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5T2A|1|2|U|682
5T2A|1|2|G|683
5T2A|1|2|A|684
5T2A|1|2|A|685
*
5T2A|1|2|U|1106
5T2A|1|2|G|1107
5T2A|1|2|A|1108
5T2A|1|2|A|1109
5T2A|1|2|G|1110
5T2A|1|2|G|1111
*
5T2A|1|2|C|1212
5T2A|1|2|A|1213
Current chains
- Chain 2
- 18S rRNA
Nearby chains
- Chain 4
- eS7
- Chain AE
- uS17
- Chain AG
- uS15
- Chain AJ
- uS8
- Chain AS
- uS12
- Chain AW
- eS27
Coloring options: