J3_5T2C_013

3D structure

PDB id

5T2C (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of the human ribosome at 3.6 Angstrom resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

AUUCG*CGGACCAGAGC*GCAUUU

Length

22 nucleotides

Bulged bases

5T2C|1|AA|G|991

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5T2C|1|AA|A|938
5T2C|1|AA|U|939
5T2C|1|AA|U|940
5T2C|1|AA|C|941
5T2C|1|AA|G|942
*
5T2C|1|AA|C|984
5T2C|1|AA|G|985
5T2C|1|AA|G|986
5T2C|1|AA|A|987
5T2C|1|AA|C|988
5T2C|1|AA|C|989
5T2C|1|AA|A|990
5T2C|1|AA|G|991
5T2C|1|AA|A|992
5T2C|1|AA|G|993
5T2C|1|AA|C|994
*
5T2C|1|AA|G|999
5T2C|1|AA|C|1000
5T2C|1|AA|A|1001
5T2C|1|AA|U|1002
5T2C|1|AA|U|1003
5T2C|1|AA|U|1004

Current chains

Chain AA

18S rRNA

Nearby chains

Chain AE

40S ribosomal protein S26

Chain AN

40S ribosomal protein S13

Chain AO

40S ribosomal protein S14

Chain Ap

40S ribosomal protein S3a

Chain j

60S ribosomal protein L37a