J3_5T2C_024
3D structure
- PDB id
- 5T2C (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of the human ribosome at 3.6 Angstrom resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GUGAACUA*UAGGG*UAAUCGAAC
- Length
- 22 nucleotides
- Bulged bases
- 5T2C|1|A|A|1534, 5T2C|1|A|A|1638, 5T2C|1|A|U|1639, 5T2C|1|A|G|1641
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5T2C|1|A|G|1530
5T2C|1|A|U|1531
5T2C|1|A|G|1532
5T2C|1|A|A|1533
5T2C|1|A|A|1534
5T2C|1|A|C|1535
5T2C|1|A|U|1536
5T2C|1|A|A|1537
*
5T2C|1|A|U|1622
5T2C|1|A|A|1623
5T2C|1|A|G|1624
5T2C|1|A|G|1625
5T2C|1|A|G|1626
*
5T2C|1|A|U|1636
5T2C|1|A|A|1637
5T2C|1|A|A|1638
5T2C|1|A|U|1639
5T2C|1|A|C|1640
5T2C|1|A|G|1641
5T2C|1|A|A|1642
5T2C|1|A|A|1643
5T2C|1|A|C|1644
Current chains
- Chain A
- 28S rRNA
Nearby chains
- Chain D
- 60S ribosomal protein L8
- Chain F
- 60S ribosomal protein L4
- Chain J
- 60S ribosomal protein L17
- Chain d
- 60S ribosomal protein L37
- Chain t
- 60S ribosomal protein L15
Coloring options: