J3_5T2C_038
3D structure
- PDB id
- 5T2C (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of the human ribosome at 3.6 Angstrom resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CGUUCUUAG*CGAGAC*GCAAUAACAG
- Length
- 25 nucleotides
- Bulged bases
- 5T2C|1|AA|A|1489
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5T2C|1|AA|C|1337
5T2C|1|AA|G|1338
5T2C|1|AA|U|1339
5T2C|1|AA|U|1340
5T2C|1|AA|C|1341
5T2C|1|AA|U|1342
5T2C|1|AA|U|1343
5T2C|1|AA|A|1344
5T2C|1|AA|G|1345
*
5T2C|1|AA|C|1384
5T2C|1|AA|G|1385
5T2C|1|AA|A|1386
5T2C|1|AA|G|1387
5T2C|1|AA|A|1388
5T2C|1|AA|C|1389
*
5T2C|1|AA|G|1481
5T2C|1|AA|C|1482
5T2C|1|AA|A|1483
5T2C|1|AA|A|1484
5T2C|1|AA|U|1485
5T2C|1|AA|A|1486
5T2C|1|AA|A|1487
5T2C|1|AA|C|1488
5T2C|1|AA|A|1489
5T2C|1|AA|G|1490
Current chains
- Chain AA
- 18S rRNA
Nearby chains
- Chain AB
- 40S ribosomal protein S20
- Chain AG
- 40S ribosomal protein S29
- Chain AJ
- 40S ribosomal protein S2
- Chain Aq
- 40S ribosomal protein S3
- Chain Ay
- 40S ribosomal protein S16
- Chain Az
- 40S ribosomal protein S17
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