J3_5T7V_003
3D structure
- PDB id
- 5T7V (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Methicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- UG*CACCAGUGG*CGA
- Length
- 14 nucleotides
- Bulged bases
- 5T7V|1|A|U|731
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_5T7V_003 not in the Motif Atlas
- Homologous match to J3_5J7L_003
- Geometric discrepancy: 0.2188
- The information below is about J3_5J7L_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_11934.4
- Basepair signature
- cWW-cWW-tWW-cWW-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
5T7V|1|A|U|680
5T7V|1|A|G|681
*
5T7V|1|A|C|725
5T7V|1|A|A|726
5T7V|1|A|C|727
5T7V|1|A|C|728
5T7V|1|A|A|729
5T7V|1|A|G|730
5T7V|1|A|U|731
5T7V|1|A|G|732
5T7V|1|A|G|733
*
5T7V|1|A|C|740
5T7V|1|A|G|741
5T7V|1|A|A|742
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain S2
- 30S ribosomal protein S11
- Chain S6
- 30S ribosomal protein S15
- Chain S9
- 30S ribosomal protein S18
- Chain SE
- 30S ribosomal protein S6
Coloring options: