J3_5T7V_005
3D structure
- PDB id
- 5T7V (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Methicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- UUUAAUUC*GAAGAACCUUAC*GGCUA
- Length
- 25 nucleotides
- Bulged bases
- 5T7V|1|A|A|967, 5T7V|1|A|A|984, 5T7V|1|A|G|985, 5T7V|1|A|A|987, 5T7V|1|A|C|988, 5T7V|1|A|U|991
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_5T7V_005 not in the Motif Atlas
- Homologous match to J3_5J7L_006
- Geometric discrepancy: 0.5494
- The information below is about J3_5J7L_006
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_83516.4
- Basepair signature
- cWW-tWW-F-F-F-F-F-tSS-cWW-F-F-cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
5T7V|1|A|U|964
5T7V|1|A|U|965
5T7V|1|A|U|966
5T7V|1|A|A|967
5T7V|1|A|A|968
5T7V|1|A|U|969
5T7V|1|A|U|970
5T7V|1|A|C|971
*
5T7V|1|A|G|982
5T7V|1|A|A|983
5T7V|1|A|A|984
5T7V|1|A|G|985
5T7V|1|A|A|986
5T7V|1|A|A|987
5T7V|1|A|C|988
5T7V|1|A|C|989
5T7V|1|A|U|990
5T7V|1|A|U|991
5T7V|1|A|A|992
5T7V|1|A|C|993
*
5T7V|1|A|G|1231
5T7V|1|A|G|1232
5T7V|1|A|C|1233
5T7V|1|A|U|1234
5T7V|1|A|A|1235
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain S1
- 30S ribosomal protein S10
Coloring options: