J3_5T7V_007

3D structure

PDB id

5T7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GC*GUGAAAAG*CC

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_5T7V_007 not in the Motif Atlas

Homologous match to J3_7A0S_001

Geometric discrepancy: 0.1334

The information below is about J3_7A0S_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_60031.2

Basepair signature

cWW-cWW-cWW-tWH-tSH-F-F

Number of instances in this motif group

7

Unit IDs

5T7V|1|B|G|30
5T7V|1|B|C|31
*
5T7V|1|B|G|520
5T7V|1|B|U|521
5T7V|1|B|G|522
5T7V|1|B|A|523
5T7V|1|B|A|524
5T7V|1|B|A|525
5T7V|1|B|A|526
5T7V|1|B|G|527
*
5T7V|1|B|C|554
5T7V|1|B|C|555

Current chains

Chain B

23S ribosomal RNA

Nearby chains

Chain L3

50S ribosomal protein L20

Chain L7

50S ribosomal protein L24